Index

A

add() (gwas_tools.helpers.sub_file.SubFile method) add_accounting_group_info() (gwas_tools.helpers.sub_file.SubFile method) add_arguments() (gwas_tools.helpers.sub_file.SubFile method) add_blank_line() (gwas_tools.helpers.dag_file.DagFile method) (gwas_tools.helpers.sub_file.SubFile method) add_bullet_list() (gwas_tools.html.html_builder.HtmlBuilder method) add_command_line() (gwas_tools.html.html_builder.HtmlBuilder method) add_command_line_block() (gwas_tools.html.html_builder.HtmlBuilder method) add_executable() (gwas_tools.helpers.sub_file.SubFile method) add_footer() (gwas_tools.html.html_builder.HtmlBuilder method)

add_job() (gwas_tools.helpers.dag_file.DagFile method) add_link() (gwas_tools.html.html_builder.HtmlBuilder method) add_logs() (gwas_tools.helpers.sub_file.SubFile method) add_paragraph() (gwas_tools.html.html_builder.HtmlBuilder method) add_plot() (gwas_tools.html.html_builder.HtmlBuilder method) add_post_script() (gwas_tools.helpers.dag_file.DagFile method) add_section() (gwas_tools.html.html_builder.HtmlBuilder method) add_specs() (gwas_tools.helpers.sub_file.SubFile method) add_subsection() (gwas_tools.html.html_builder.HtmlBuilder method) add_subsubsection() (gwas_tools.html.html_builder.HtmlBuilder method)

B

butter_lowpass() (in module gwas_tools.utils.signal_utils)

butter_lowpass_filter() (in module gwas_tools.utils.signal_utils)

C

close_card() (gwas_tools.html.html_builder.HtmlBuilder method) close_div() (gwas_tools.html.html_builder.HtmlBuilder method)

combo_plot_name() (in module gwas_tools.utils.file_utils) create_comparison_folder() (in module gwas_tools.utils.file_utils) culprit_plot_name() (in module gwas_tools.utils.file_utils)

D

DagFile (class in gwas_tools.helpers.dag_file)

F

from_mat() (in module gwas_tools.utils.file_utils)

G

generate_algo_corr_script() (in module gwas_tools.automation.scripts) generate_algo_script() (in module gwas_tools.automation.scripts) generate_comparison_corr_script() (in module gwas_tools.automation.scripts) generate_comparison_script() (in module gwas_tools.automation.scripts) generate_condor_post_script() (in module gwas_tools.automation.scripts) generate_web_page() (in module gwas_tools.summary_pages.daily_correlations_page) (in module gwas_tools.summary_pages.scattered_light_page) get_channel_of_combo_with_imf() (gwas_tools.utils.file_utils.YmlFile method) get_channel_of_imf() (gwas_tools.utils.file_utils.YmlFile method) get_channel_wo_ifo() (in module gwas_tools.utils.signal_utils) get_channels_list() (gwas_tools.utils.file_utils.YmlFile method) get_combos() (gwas_tools.utils.file_utils.YmlFile method) (in module gwas_tools.utils.signal_utils) get_corr_of_combo_with_imf() (gwas_tools.utils.file_utils.YmlFile method) get_corr_of_imf() (gwas_tools.utils.file_utils.YmlFile method) get_correlation_between() (in module gwas_tools.utils.signal_utils) get_data_from_gwf_files() (in module gwas_tools.utils.signal_utils) get_data_from_time_series_dict() (in module gwas_tools.utils.signal_utils) get_event_position() (gwas_tools.utils.file_utils.YmlFile method) get_formatted_code() (gwas_tools.html.html_builder.HtmlBuilder method) get_formatted_link() (gwas_tools.html.html_builder.HtmlBuilder method) get_gps() (gwas_tools.utils.file_utils.YmlFile method) get_gps_and_freq() (in module gwas_tools.helpers.fetch_params) get_gps_interval_extremes() (in module gwas_tools.utils.signal_utils) get_gps_sequence() (in module gwas_tools.helpers.fetch_params) get_ifo_of_channel() (in module gwas_tools.utils.signal_utils) get_imfs() (in module gwas_tools.utils.signal_utils) get_imfs_count() (gwas_tools.utils.file_utils.YmlFile method) get_instrument_lock_data() (in module gwas_tools.utils.signal_utils) get_lock_channel_name_for_ifo() (in module gwas_tools.utils.signal_utils) get_lowpass_frequency() (gwas_tools.utils.file_utils.YmlFile method) get_mean_freq_of_imf() (gwas_tools.utils.file_utils.YmlFile method) get_output_path() (gwas_tools.utils.file_utils.YmlFile method) get_predictor() (in module gwas_tools.utils.signal_utils)

get_predictors() (in module gwas_tools.utils.signal_utils) get_results_folders() (in module gwas_tools.utils.file_utils) get_sampling_frequency() (gwas_tools.utils.file_utils.YmlFile method) get_scattering_factor() (gwas_tools.utils.file_utils.YmlFile method) get_seconds() (gwas_tools.utils.file_utils.YmlFile method) get_seismic_channels() (gwas_tools.utils.file_utils.YmlFile method) get_smoothing_window() (gwas_tools.utils.file_utils.YmlFile method) get_target_channel() (gwas_tools.utils.file_utils.YmlFile method) gwas_tools.algorithms.scattered_light module gwas_tools.algorithms.scattered_light_gwf module gwas_tools.algorithms.scattered_light_raw module gwas_tools.automation.scripts module gwas_tools.helpers.dag_file module gwas_tools.helpers.fetch_params module gwas_tools.helpers.sub_file module gwas_tools.html.html_builder module gwas_tools.summary_pages.daily_correlations_page module gwas_tools.summary_pages.scattered_light_page module gwas_tools.utils.file_utils module gwas_tools.utils.plot_utils module gwas_tools.utils.signal_utils module

H

HtmlBuilder (class in gwas_tools.html.html_builder)

I

imfs_exists() (in module gwas_tools.utils.file_utils)

is_locked() (gwas_tools.utils.file_utils.YmlFile method) is_valid_folder() (in module gwas_tools.utils.file_utils)

L

load_ias() (in module gwas_tools.utils.file_utils) load_imfs() (in module gwas_tools.utils.file_utils)

load_predictors() (in module gwas_tools.utils.file_utils) lowpass() (in module gwas_tools.utils.signal_utils)

M

mean_frequency() (in module gwas_tools.utils.signal_utils) module gwas_tools.algorithms.scattered_light gwas_tools.algorithms.scattered_light_gwf gwas_tools.algorithms.scattered_light_raw gwas_tools.automation.scripts gwas_tools.helpers.dag_file gwas_tools.helpers.fetch_params gwas_tools.helpers.sub_file gwas_tools.html.html_builder gwas_tools.summary_pages.daily_correlations_page gwas_tools.summary_pages.scattered_light_page gwas_tools.utils.file_utils gwas_tools.utils.plot_utils gwas_tools.utils.signal_utils

O

omegagram_plot_name() (in module gwas_tools.utils.file_utils)

open_card() (gwas_tools.html.html_builder.HtmlBuilder method) open_div() (gwas_tools.html.html_builder.HtmlBuilder method)

P

parameters_table() (gwas_tools.html.html_builder.HtmlBuilder method) plot_combinations() (in module gwas_tools.utils.plot_utils) plot_imf() (in module gwas_tools.utils.plot_utils) plot_imfs() (in module gwas_tools.utils.plot_utils) plot_omegagram() (in module gwas_tools.utils.plot_utils)

plot_omegagram_download() (in module gwas_tools.utils.plot_utils) plot_omegagrams() (in module gwas_tools.utils.plot_utils) plot_seismic_data() (in module gwas_tools.utils.plot_utils) plot_summaries() (in module gwas_tools.utils.plot_utils) predictors_exists() (in module gwas_tools.utils.file_utils)

S

save() (gwas_tools.helpers.dag_file.DagFile method) (gwas_tools.helpers.sub_file.SubFile method) (gwas_tools.utils.file_utils.YmlFile method) save_envelopes() (in module gwas_tools.utils.file_utils) save_imfs() (in module gwas_tools.utils.file_utils) save_page() (gwas_tools.html.html_builder.HtmlBuilder method) save_predictors() (in module gwas_tools.utils.file_utils) scattered_light() (in module gwas_tools.algorithms.scattered_light)

scattered_light_gwf() (in module gwas_tools.algorithms.scattered_light_gwf) scattered_light_raw() (in module gwas_tools.algorithms.scattered_light_raw) seismic_plot_name() (in module gwas_tools.utils.file_utils) set_parent() (gwas_tools.helpers.dag_file.DagFile method) smooth() (in module gwas_tools.utils.signal_utils) SubFile (class in gwas_tools.helpers.sub_file) summary_chamber_plot_name() (in module gwas_tools.utils.file_utils) summary_freq_plot_name() (in module gwas_tools.utils.file_utils) summary_table() (in module gwas_tools.utils.file_utils)

U

upper_envelope() (in module gwas_tools.utils.signal_utils)

W

write_2nd_best_correlation_section() (gwas_tools.utils.file_utils.YmlFile method) write_combo_section() (gwas_tools.utils.file_utils.YmlFile method) write_correlation_section() (gwas_tools.utils.file_utils.YmlFile method)

write_lock_info() (gwas_tools.utils.file_utils.YmlFile method) write_parameters() (gwas_tools.utils.file_utils.YmlFile method) write_seismic_channels() (gwas_tools.utils.file_utils.YmlFile method)

Y

yml_exists() (in module gwas_tools.utils.file_utils)

YmlFile (class in gwas_tools.utils.file_utils)